Open your theme's cinnamon.css as root and find the section that looks like this in the default theme:
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#notification {
font-size: 8.5pt;
border-radius: 8px 8px 8px 8px;
border: 2px solid #a5a5a5;
background-gradient-direction: vertical;
background-gradient-start: rgba(85,85,85,0.8);
background-gradient-end: rgba(85,85,85,0.8);
padding: 8px 8px 8px 8px;
spacing-rows: 10px;
spacing-columns: 10px;
margin-from-right-edge-of-screen: 20px;
margin-from-top-edge-of-screen: 30px;
width: 34em;
color: white;
}
The line you want to change is "margin-from-top-edge-of-screen: 30px;"; margin-from-bottom doesn't work so you have to put in your screen size height and subtract distance from screen + notification popup height. My screen height is 768px and I use a bottom panel so I would put something like
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margin-from-top-edge-of-screen: 700px;
To test notification placement type this in terminal:
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notify-send "hallo"
...whch brings up a notification saying "hallo"
